埃希氏菌的遗传演化关系分析

doi:10.19640/j.cnki.jtau.2022.04.009

Journal of Tianjin Agricultural University ›› 2022, Vol. 29 ›› Issue (4): 43-48.doi: 10.19640/j.cnki.jtau.2022.04.009

• Researches and Scientific Notes • Previous Articles Next Articles

Analysis of genetic evolution relationship of Escherichia

Liu Junhua, Zhou Yilian, Cui Yaoxin, Liu Yanfei, Yang Jiande^{Corresponding Author}

Tianjin Key Laboratory of Agricultural Animal Breeding and Healthy Husbandry, College of Animal Science and Veterinary Medicine, Tianjin Agricultural University, Tianjin 300392, China

Received:2019-12-26 Online:2022-12-30 Published:2023-01-03

Abstract

Abstract: In order to explore the genetic evolution of Escherichia in different countries and regions, and to clarify the genetic relationship of E. in different countries and regions, bioinformatics methods were used to analyze and compare the 16S rRNA genes obtained from laboratory isolation and NCBI, and construct molecular evolutionary tree after pruning. The results showed that there was a certain genetic relationship between the strains of E. coli, which may be the relationship between ancestors and offspring, there were varying degrees of variation, and the ability of variation among different strains had different levels. The transformation ability of E. coli and E. fergusonii was the strongest, and the two strains evolved from the same original strain in a very early period. E. albertii strains coexisted in the same region with highly conservative strains, and cross-evolution existed among Asia, Oceania and Antarctica. E. marmotae and E. vulneris strains originated in the Asian continent, and E. marmotae strains from China were clustered into three groups. E. Marmota had two branches of cross evolution in China, India and South Korea. E. marmota was closely related to E. vulneris. The results provide reference for elucidating the molecular epidemiology of Escherichia.

Key words: E. coli, genetic evolution, evolutionary tree, homology, relationship, origin

CLC Number:

S852.61

Liu Junhua, Zhou Yilian, Cui Yaoxin, Liu Yanfei, Yang Jiande. Analysis of genetic evolution relationship of Escherichia[J]. Journal of Tianjin Agricultural University, 2022, 29(4): 43-48.

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Analysis of genetic evolution relationship of Escherichia

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